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Moniliophthora perniciosa development: key genes involved in stress-mediated cell wall organization and autophagy.

Identifieur interne : 000081 ( Main/Exploration ); précédent : 000080; suivant : 000082

Moniliophthora perniciosa development: key genes involved in stress-mediated cell wall organization and autophagy.

Auteurs : Edson Mario De Andrade Silva [Brésil] ; Sara Pereira Menezes Reis [Brésil] ; Caio Suzart Argolo [Brésil] ; Dayane Santos Gomes [Brésil] ; Ceslaine Santos Barbosa [Brésil] ; Karina Peres Gramacho [Brésil] ; Lidiane Figueredo Ribeiro [Brésil] ; Raner José Santana Silva [Brésil] ; Fabienne Micheli [France]

Source :

RBID : pubmed:32194118

Abstract

Moniliophthora perniciosa is a basidiomycete responsible for the witches' broom disease in cacao (Theobroma cacao L.). Chitin synthase (CHS), chitinase (CHIT) and autophagy (ATG) genes have been associated to stress response preceding the formation of basidiocarp. An analysis of literature mining, interactomics and gene expression was developed to identify the main proteins related to development, cell wall organization and autophagy in M. perniciosa. TORC2 complex elements were identified and were involved in the response to the nutrient starvation during the fungus development stages preceding the basidiocarp formation. This complex interacted with target proteins related to cell wall synthesis and to polarization and cell division (FKS1, CHS, CDC42, ROM2). Autolysis and autophagy processes were associated to CHIT2, ATG8 and to the TORC1 complex (TOR1 and KOG1), which is central in the upstream signalization of the stress response due to nutrient starvation and growth regulation. Other important elements that participate to steps preceding basidiocarp formation were also identified (KOG1, SSZ1, GDI1, FKS1, CCD10, CKS1, CDC42, RHO1, AVO1, BAG7). Similar gene expression patterns during fungus reproductive structure formation and when treated by rapamycin (a nutritional related-autophagy stress agent) were observed: cell division related-genes were repressed while those related to autolysis/autophagy were overexpressed.

DOI: 10.1016/j.ijbiomac.2020.03.125
PubMed: 32194118


Affiliations:


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<div type="abstract" xml:lang="en">Moniliophthora perniciosa is a basidiomycete responsible for the witches' broom disease in cacao (Theobroma cacao L.). Chitin synthase (CHS), chitinase (CHIT) and autophagy (ATG) genes have been associated to stress response preceding the formation of basidiocarp. An analysis of literature mining, interactomics and gene expression was developed to identify the main proteins related to development, cell wall organization and autophagy in M. perniciosa. TORC2 complex elements were identified and were involved in the response to the nutrient starvation during the fungus development stages preceding the basidiocarp formation. This complex interacted with target proteins related to cell wall synthesis and to polarization and cell division (FKS1, CHS, CDC42, ROM2). Autolysis and autophagy processes were associated to CHIT2, ATG8 and to the TORC1 complex (TOR1 and KOG1), which is central in the upstream signalization of the stress response due to nutrient starvation and growth regulation. Other important elements that participate to steps preceding basidiocarp formation were also identified (KOG1, SSZ1, GDI1, FKS1, CCD10, CKS1, CDC42, RHO1, AVO1, BAG7). Similar gene expression patterns during fungus reproductive structure formation and when treated by rapamycin (a nutritional related-autophagy stress agent) were observed: cell division related-genes were repressed while those related to autolysis/autophagy were overexpressed.</div>
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<AbstractText>Moniliophthora perniciosa is a basidiomycete responsible for the witches' broom disease in cacao (Theobroma cacao L.). Chitin synthase (CHS), chitinase (CHIT) and autophagy (ATG) genes have been associated to stress response preceding the formation of basidiocarp. An analysis of literature mining, interactomics and gene expression was developed to identify the main proteins related to development, cell wall organization and autophagy in M. perniciosa. TORC2 complex elements were identified and were involved in the response to the nutrient starvation during the fungus development stages preceding the basidiocarp formation. This complex interacted with target proteins related to cell wall synthesis and to polarization and cell division (FKS1, CHS, CDC42, ROM2). Autolysis and autophagy processes were associated to CHIT2, ATG8 and to the TORC1 complex (TOR1 and KOG1), which is central in the upstream signalization of the stress response due to nutrient starvation and growth regulation. Other important elements that participate to steps preceding basidiocarp formation were also identified (KOG1, SSZ1, GDI1, FKS1, CCD10, CKS1, CDC42, RHO1, AVO1, BAG7). Similar gene expression patterns during fungus reproductive structure formation and when treated by rapamycin (a nutritional related-autophagy stress agent) were observed: cell division related-genes were repressed while those related to autolysis/autophagy were overexpressed.</AbstractText>
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<Affiliation>Universidade Estadual de Santa Cruz (UESC), Departamento de Ciências Biológicas (DCB), Centro de Biotecnologia e Genética (CBG), Rodovia Ilhéus-Itabuna, km 16, 45662-900 Ilhéus, BA, Brazil.</Affiliation>
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<LastName>Barbosa</LastName>
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<AffiliationInfo>
<Affiliation>Universidade Estadual de Santa Cruz (UESC), Departamento de Ciências Biológicas (DCB), Centro de Biotecnologia e Genética (CBG), Rodovia Ilhéus-Itabuna, km 16, 45662-900 Ilhéus, BA, Brazil; Cocoa Research Center, CEPLAC/CEPEC, Itabuna, BA, Brazil.</Affiliation>
</AffiliationInfo>
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<LastName>Gramacho</LastName>
<ForeName>Karina Peres</ForeName>
<Initials>KP</Initials>
<AffiliationInfo>
<Affiliation>Cocoa Research Center, CEPLAC/CEPEC, Itabuna, BA, Brazil.</Affiliation>
</AffiliationInfo>
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<ForeName>Lidiane Figueredo</ForeName>
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<AffiliationInfo>
<Affiliation>Universidade Estadual de Santa Cruz (UESC), Departamento de Ciências Biológicas (DCB), Centro de Biotecnologia e Genética (CBG), Rodovia Ilhéus-Itabuna, km 16, 45662-900 Ilhéus, BA, Brazil.</Affiliation>
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<LastName>Silva</LastName>
<ForeName>Raner José Santana</ForeName>
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<Affiliation>Universidade Estadual de Santa Cruz (UESC), Departamento de Ciências Biológicas (DCB), Centro de Biotecnologia e Genética (CBG), Rodovia Ilhéus-Itabuna, km 16, 45662-900 Ilhéus, BA, Brazil.</Affiliation>
</AffiliationInfo>
</Author>
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<ForeName>Fabienne</ForeName>
<Initials>F</Initials>
<AffiliationInfo>
<Affiliation>Universidade Estadual de Santa Cruz (UESC), Departamento de Ciências Biológicas (DCB), Centro de Biotecnologia e Genética (CBG), Rodovia Ilhéus-Itabuna, km 16, 45662-900 Ilhéus, BA, Brazil; CIRAD, UMR AGAP, F-34398 Montpellier, France. Electronic address: fabienne.micheli@cirad.fr.</Affiliation>
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<Language>eng</Language>
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</PublicationTypeList>
<ArticleDate DateType="Electronic">
<Year>2020</Year>
<Month>03</Month>
<Day>16</Day>
</ArticleDate>
</Article>
<MedlineJournalInfo>
<Country>Netherlands</Country>
<MedlineTA>Int J Biol Macromol</MedlineTA>
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<ISSNLinking>0141-8130</ISSNLinking>
</MedlineJournalInfo>
<CitationSubset>IM</CitationSubset>
<KeywordList Owner="NOTNLM">
<Keyword MajorTopicYN="N">Gene expression</Keyword>
<Keyword MajorTopicYN="N">Interactomics</Keyword>
<Keyword MajorTopicYN="N">Nutrient starvation</Keyword>
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<Year>2019</Year>
<Month>12</Month>
<Day>08</Day>
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<PubMedPubDate PubStatus="revised">
<Year>2020</Year>
<Month>02</Month>
<Day>29</Day>
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<PubMedPubDate PubStatus="accepted">
<Year>2020</Year>
<Month>03</Month>
<Day>13</Day>
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<Month>3</Month>
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<PubMedPubDate PubStatus="entrez">
<Year>2020</Year>
<Month>3</Month>
<Day>21</Day>
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<ArticleId IdType="pii">S0141-8130(19)39589-3</ArticleId>
<ArticleId IdType="doi">10.1016/j.ijbiomac.2020.03.125</ArticleId>
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<list>
<country>
<li>Brésil</li>
<li>France</li>
</country>
<region>
<li>Bahia</li>
<li>Languedoc-Roussillon</li>
<li>Occitanie (région administrative)</li>
</region>
<settlement>
<li>Montpellier</li>
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</list>
<tree>
<country name="Brésil">
<region name="Bahia">
<name sortKey="De Andrade Silva, Edson Mario" sort="De Andrade Silva, Edson Mario" uniqKey="De Andrade Silva E" first="Edson Mario" last="De Andrade Silva">Edson Mario De Andrade Silva</name>
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<name sortKey="Argolo, Caio Suzart" sort="Argolo, Caio Suzart" uniqKey="Argolo C" first="Caio Suzart" last="Argolo">Caio Suzart Argolo</name>
<name sortKey="Barbosa, Ceslaine Santos" sort="Barbosa, Ceslaine Santos" uniqKey="Barbosa C" first="Ceslaine Santos" last="Barbosa">Ceslaine Santos Barbosa</name>
<name sortKey="Gomes, Dayane Santos" sort="Gomes, Dayane Santos" uniqKey="Gomes D" first="Dayane Santos" last="Gomes">Dayane Santos Gomes</name>
<name sortKey="Gramacho, Karina Peres" sort="Gramacho, Karina Peres" uniqKey="Gramacho K" first="Karina Peres" last="Gramacho">Karina Peres Gramacho</name>
<name sortKey="Reis, Sara Pereira Menezes" sort="Reis, Sara Pereira Menezes" uniqKey="Reis S" first="Sara Pereira Menezes" last="Reis">Sara Pereira Menezes Reis</name>
<name sortKey="Ribeiro, Lidiane Figueredo" sort="Ribeiro, Lidiane Figueredo" uniqKey="Ribeiro L" first="Lidiane Figueredo" last="Ribeiro">Lidiane Figueredo Ribeiro</name>
<name sortKey="Silva, Raner Jose Santana" sort="Silva, Raner Jose Santana" uniqKey="Silva R" first="Raner José Santana" last="Silva">Raner José Santana Silva</name>
</country>
<country name="France">
<region name="Occitanie (région administrative)">
<name sortKey="Micheli, Fabienne" sort="Micheli, Fabienne" uniqKey="Micheli F" first="Fabienne" last="Micheli">Fabienne Micheli</name>
</region>
</country>
</tree>
</affiliations>
</record>

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